@> 1159 atoms and 20 coordinate set(s) were parsed in 0.18s.
@> 1156 atoms and 20 coordinate set(s) were parsed in 0.18s.
Visualizations and results¶
Original Structure Visualization¶
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@> 1159 atoms and 20 coordinate set(s) were parsed in 0.18s.
@> 1156 atoms and 20 coordinate set(s) were parsed in 0.18s.
2k0qA_TEMP
Blue:2lelA Red:2k0qA
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AlphaFold predictions¶
Best AF prediction to fold 1¶
@> 574 atoms and 1 coordinate set(s) were parsed in 0.02s.
@> 1159 atoms and 20 coordinate set(s) were parsed in 0.18s.
Blue:ShallowMsa_002_unrelaxed_rank_005_alphafold2_ptm_model_5_seed_000 Red:2lelA
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Best AF prediction to fold 2¶
@> 574 atoms and 1 coordinate set(s) were parsed in 0.02s.
@> 1156 atoms and 20 coordinate set(s) were parsed in 0.18s.
Blue:ShallowMsa_006_unrelaxed_rank_005_alphafold2_ptm_model_4_seed_000 Red:2k0qA
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EsmFold Prediction¶
Best EsmFold prediction to fold 1¶
@> 1159 atoms and 20 coordinate set(s) were parsed in 0.18s.
@> 496 atoms and 1 coordinate set(s) were parsed in 0.01s.
@> 1159 atoms and 20 coordinate set(s) were parsed in 0.18s.
@> 496 atoms and 1 coordinate set(s) were parsed in 0.01s.
reference and target coordinate arrays must have same number of atoms ShallowMsa_001_8_TEMP
Blue:2lelA Red:ShallowMsa_001_8
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Best EsmFold prediction to fold 2¶
@> 1156 atoms and 20 coordinate set(s) were parsed in 0.18s.
@> 11480 atoms and 1 coordinate set(s) were parsed in 0.33s.
reference and target coordinate arrays must have same number of atoms
@> 1156 atoms and 20 coordinate set(s) were parsed in 0.23s.
@> 11480 atoms and 1 coordinate set(s) were parsed in 0.30s.
2lelA_esm_TEMP
Blue:2k0qA Red:2lelA_esm
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Contact maps Msa Transformers¶
No max_f1Score_pdb1 No max_f1Score_pdb2
No max_f1Score_pdb1 No max_f1Score_pdb2
No plot for f1Score_1 No plot for f1Score_2